CDS

Accession Number TCMCG006C40846
gbkey CDS
Protein Id XP_013743577.1
Location complement(join(12560151..12560344,12560414..12560648,12560709..12561229,12561325..12561637,12561738..12561830,12561904..12561989,12562875..12562930,12563018..12563256,12563324..12563409,12563534..12563582,12563659..12563725,12563828..12563943,12564026..12564092,12564207..12564295,12564372..12564542))
Gene LOC106446409
GeneID 106446409
Organism Brassica napus

Protein

Length 793aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013888123.2
Definition tRNA (cytosine(34)-C(5))-methyltransferase-like isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K15334        [VIEW IN KEGG]
EC 2.1.1.202        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000049        [VIEW IN EMBL-EBI]
GO:0001510        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008173        [VIEW IN EMBL-EBI]
GO:0008175        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016427        [VIEW IN EMBL-EBI]
GO:0016428        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0030488        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTAGAGGAAGACAGAGAGGTCGTTCTCAGAGAAAACACTTCAAAGAGAGCAGAGAGAATGTCTGGAAACGCCCCAAATCCGATGCTCCCGACAACGCCGCCGTCGCTGACAAACCCACCTGGGAGCCTTTCTTGACTGACAACCCTAACTTCGAGGAGTACTACAAGGAACAAGGGATAGTGAAAGCAGAAGAGTGGGAGCTGTTCATGGAGTTTCTTCGTAAGCCTTTGCCTGCTGCCTTTAGGGTTAACTCCAATAGCCAGTTTTGCGATGAGATTATATCCATATTGGAGAATGACTTTGTGAAATCTCTTCACGCCGAGGCCATAGAAGGTGGTGAGATGGAGGCTATTAAGCCCTTGCCTTGGTATCCTAAGAATCTCGCTTGGCATTCCAATTTTTCTCGCAAGGAGATTAGGAAAAATAAGATACTTGAGAGGTTTCATGAATTTCTGAAACTAGAAAATGAAGTTGGAAACATGACTAGACAGGAAGCTGTTAGCATGGTGCCTCCTCTTTTCCTCGACGTACATCCAGATCATTTTGTGCTTGACATGTGTGCTGCACCGGGTTCCAAAACATTTCAGCTGCTCGAGATTATACATGGAGCATCAGAACCAGGAACTCTACCTAATGGAATGGTGGTGGCTAACGATGTTGATTTCCAAAGATCTAACCTTCTTATTCACCAAACAAAGAGAATGTGCACCGCAAACTTGATAGTGACTAATCATGAAGGGCAACAGTTCCCCGGTTGTCGCTTGAAAGGACTAAGTGAAGATATGCCCATTAATCAACTTTCCTTTGACCGTGTTCTGTGTGATGTTCCGTGCAGTGGTGATGGTACCCTGCGCAAAGCTCCAGACATCTGGCGGAAATGGAATTCTGGAATGGGCAATGGACTCCATAGCCTACAGGTTATCCTTGCTATGAGGGGTTTATCGCTGTTGAAAGTTGGTGGGAAAATGATATACTCAACCTGCTCAATGAACCCAGTTGAGGATGAAGCTGTTGTTGCTGAGATTCTAAGGAGGTGTGGAGACTCTGTTGAACTTGTAGATGTTTCTGATAAGCTTCCTGAACTCATACGGAGGCCAGGTCTCAAGACATGGAAGGTGCGTGATAAAGGTGGGTGGTTTACTTCTTACAAAGACGTTCCTCAAAACCGACGAGGAGGAGTCATTGTGAGCATGTTTCCTTCTGGGAAAAACCTCAAGGACTCAACCGAAACAACTCAGGAGAATGAGAATGGTGGTGTTCAAAATGAGTGCAAGGAAACAGAGAACTCTGTGGTGGATGCTATACCTGATGAACCAATTGTTGAAGTGTCTGATCTTCCACTTGAACGTTGCATGAGGATAGTGCCTCATGATCAGAACACTGGAGCCTTTTTCATCGCGGTTCTTCACAAAGTTTCACCACTGCCAGAATTTCAGGAGAAACCAAATCCAAGAAAGCACTCATCTAAGAAAAATGCTGACTCGACGGTAAAGTCTCCGCCTGAAGAAGCTGTTGTCAGTGCTAATACTGAACCAGTAGAGAGTCCAGTGGAAACAGTTATAGAAGAAGATGCAAACAATGAGAAAGATGATAGCTTGGTGGAGCCTGAGAAGCAAACCACTGAGGGAGAAACCACCATCACTGAAGAGAAAGAAGCTAATCCTCCGAGTCAAGCGGGAGGCAAGAGAAAAGTACCGATGCAGGGGAGGTGGAAAGGCTTCGACCCTGTTGTTTTCCTGAAAGAGGAGACGTTAATCGATAGCATCAAGGAGTTTTACGGTATCAAAGATGAATCATTCCCGTTGAACGGTCATCTGGTGACAAGAAACACCGACACAAGCAGCGTGAAGAGGATTTACTATGTTTCAAAATCTGTTAAAGAAGTTCTTCAGCTGAATTTTGCAGTCGGACAGCAGCTTAAGATTGCTTCCGTTGGCCTCAAGATGTTTGAGAGACAATCAGCAAAAGAAGGTTCAAGCAAGCCGTGCTCATTCCGTATATCAGCGGAGGGACTACCTGTGATCCTTCCATACATCACCAAACAAGTTCTCTACACTCCAATGGCAGACTTCAAACATCTTCTTGAACACAAATCGATCAGGTTTCCCGATTTTGTCAATCCACAGTTGAGTCAGAAAGCAACTGAACTTGTTCTGGGATGCTGTGTGGTGATTCTCAGCGACGGTGAAGAACCTGTGAAAGCAGATGCATCTACAATTGCTATCAGTTGCTGGAGAGGGAATAACAGTTTGGCTGTTATGATCACTCCTGCGGATTGCCAGGAGCTTCTAGAGAGACTTGCTGAGAGAACACCAAAAACAGGTGGTGGTTCCGTTGATGGGAACAACGGCGATTCAGTAGCTATGGAGACAGCTTAA
Protein:  
MGRGRQRGRSQRKHFKESRENVWKRPKSDAPDNAAVADKPTWEPFLTDNPNFEEYYKEQGIVKAEEWELFMEFLRKPLPAAFRVNSNSQFCDEIISILENDFVKSLHAEAIEGGEMEAIKPLPWYPKNLAWHSNFSRKEIRKNKILERFHEFLKLENEVGNMTRQEAVSMVPPLFLDVHPDHFVLDMCAAPGSKTFQLLEIIHGASEPGTLPNGMVVANDVDFQRSNLLIHQTKRMCTANLIVTNHEGQQFPGCRLKGLSEDMPINQLSFDRVLCDVPCSGDGTLRKAPDIWRKWNSGMGNGLHSLQVILAMRGLSLLKVGGKMIYSTCSMNPVEDEAVVAEILRRCGDSVELVDVSDKLPELIRRPGLKTWKVRDKGGWFTSYKDVPQNRRGGVIVSMFPSGKNLKDSTETTQENENGGVQNECKETENSVVDAIPDEPIVEVSDLPLERCMRIVPHDQNTGAFFIAVLHKVSPLPEFQEKPNPRKHSSKKNADSTVKSPPEEAVVSANTEPVESPVETVIEEDANNEKDDSLVEPEKQTTEGETTITEEKEANPPSQAGGKRKVPMQGRWKGFDPVVFLKEETLIDSIKEFYGIKDESFPLNGHLVTRNTDTSSVKRIYYVSKSVKEVLQLNFAVGQQLKIASVGLKMFERQSAKEGSSKPCSFRISAEGLPVILPYITKQVLYTPMADFKHLLEHKSIRFPDFVNPQLSQKATELVLGCCVVILSDGEEPVKADASTIAISCWRGNNSLAVMITPADCQELLERLAERTPKTGGGSVDGNNGDSVAMETA